Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC011467.2-201ENST00000598425 242 ntBASIC18.27■□□□□ 0.52
HOXA6P31267 AL691403.2-201ENST00000618460 490 ntBASIC18.27■□□□□ 0.52
HOXA6P31267 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXA6P31267 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXA6P31267 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXA6P31267 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXA6P31267 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXA6P31267 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXA6P31267 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXA6P31267 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXA6P31267 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXA6P31267 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXA6P31267 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.26■□□□□ 0.51
HOXA6P31267 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXA6P31267 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXA6P31267 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXA6P31267 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HOXA6P31267 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXA6P31267 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXA6P31267 AC104109.2-201ENST00000602919 1418 ntBASIC18.25■□□□□ 0.51
HOXA6P31267 AC092667.1-201ENST00000434301 2586 ntBASIC18.25■□□□□ 0.51
HOXA6P31267 HLA-J-201ENST00000462773 1622 ntBASIC18.25■□□□□ 0.51
HOXA6P31267 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HOXA6P31267 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXA6P31267 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.25■□□□□ 0.51
HOXA6P31267 AC021087.4-201ENST00000563761 564 ntBASIC18.25■□□□□ 0.51
HOXA6P31267 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.25■□□□□ 0.51
HOXA6P31267 AL138831.2-201ENST00000606564 490 ntBASIC18.25■□□□□ 0.51
HOXA6P31267 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXA6P31267 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HOXA6P31267 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HOXA6P31267 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HOXA6P31267 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXA6P31267 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXA6P31267 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXA6P31267 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXA6P31267 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 LINC01521-201ENST00000504184 1943 ntBASIC18.24■□□□□ 0.51
HOXA6P31267 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXA6P31267 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXA6P31267 ABCD1P5-201ENST00000445663 754 ntBASIC18.24■□□□□ 0.51
HOXA6P31267 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXA6P31267 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 AC034105.1-201ENST00000563488 319 ntBASIC18.24■□□□□ 0.51
HOXA6P31267 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 AC140113.2-201ENST00000604370 208 ntBASIC18.24■□□□□ 0.51
HOXA6P31267 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXA6P31267 AC055717.3-201ENST00000622967 595 ntBASIC18.24■□□□□ 0.51
HOXA6P31267 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXA6P31267 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXA6P31267 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXA6P31267 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXA6P31267 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HOXA6P31267 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms