Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.87■□□□□ 0.93
CTGFP29279 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.87■□□□□ 0.93
CTGFP29279 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.87■□□□□ 0.93
CTGFP29279 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.87■□□□□ 0.93
CTGFP29279 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.87■□□□□ 0.93
CTGFP29279 AC025062.2-201ENST00000605477 670 ntBASIC20.87■□□□□ 0.93
CTGFP29279 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CTGFP29279 AC134684.3-201ENST00000641758 218 ntBASIC20.87■□□□□ 0.93
CTGFP29279 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.87■□□□□ 0.93
CTGFP29279 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.87■□□□□ 0.93
CTGFP29279 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTGFP29279 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
CTGFP29279 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.87■□□□□ 0.93
CTGFP29279 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.86■□□□□ 0.93
CTGFP29279 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CTGFP29279 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTGFP29279 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 AL591424.1-201ENST00000442569 1213 ntBASIC20.86■□□□□ 0.93
CTGFP29279 AC004967.1-201ENST00000453589 447 ntBASIC20.86■□□□□ 0.93
CTGFP29279 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.86■□□□□ 0.93
CTGFP29279 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTGFP29279 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTGFP29279 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 AL163051.1-201ENST00000569214 1512 ntBASIC20.85■□□□□ 0.93
CTGFP29279 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.85■□□□□ 0.93
CTGFP29279 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.85■□□□□ 0.93
CTGFP29279 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.85■□□□□ 0.93
CTGFP29279 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.85■□□□□ 0.93
CTGFP29279 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.85■□□□□ 0.93
CTGFP29279 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.85■□□□□ 0.93
CTGFP29279 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
CTGFP29279 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTGFP29279 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
CTGFP29279 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.84■□□□□ 0.93
CTGFP29279 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CTGFP29279 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.84■□□□□ 0.93
CTGFP29279 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CTGFP29279 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.84■□□□□ 0.93
CTGFP29279 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.84■□□□□ 0.93
CTGFP29279 AL138831.2-201ENST00000606564 490 ntBASIC20.84■□□□□ 0.93
CTGFP29279 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.84■□□□□ 0.93
CTGFP29279 HLA-J-201ENST00000462773 1622 ntBASIC20.84■□□□□ 0.93
CTGFP29279 AC099343.3-201ENST00000605834 2503 ntBASIC20.84■□□□□ 0.93
CTGFP29279 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTGFP29279 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.84■□□□□ 0.93
CTGFP29279 LINC01006-201ENST00000333319 2292 ntBASIC20.84■□□□□ 0.93
CTGFP29279 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.84■□□□□ 0.93
CTGFP29279 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTGFP29279 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CTGFP29279 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.83■□□□□ 0.93
CTGFP29279 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTGFP29279 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTGFP29279 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CTGFP29279 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTGFP29279 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTGFP29279 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms