Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC135776.1-201ENST00000319817 2481 ntBASIC19.5■□□□□ 0.71
MMP8P22894 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.5■□□□□ 0.71
MMP8P22894 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.5■□□□□ 0.71
MMP8P22894 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP8P22894 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.5■□□□□ 0.71
MMP8P22894 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP8P22894 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 AC112497.1-201ENST00000624824 639 ntBASIC19.5■□□□□ 0.71
MMP8P22894 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP8P22894 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP8P22894 AC093677.2-201ENST00000600169 1863 ntBASIC19.5■□□□□ 0.71
MMP8P22894 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 ESPNP-201ENST00000270691 2015 ntBASIC19.49■□□□□ 0.71
MMP8P22894 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 AIRN-201ENST00000601203 4374 ntBASIC19.49■□□□□ 0.71
MMP8P22894 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.49■□□□□ 0.71
MMP8P22894 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 AC104390.1-201ENST00000555663 520 ntBASIC19.49■□□□□ 0.71
MMP8P22894 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
MMP8P22894 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.49■□□□□ 0.71
MMP8P22894 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 AC145285.6-201ENST00000604632 637 ntBASIC19.49■□□□□ 0.71
MMP8P22894 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP8P22894 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.49■□□□□ 0.71
MMP8P22894 AC007613.1-201ENST00000572811 2597 ntBASIC19.49■□□□□ 0.71
MMP8P22894 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 SDHAP2-201ENST00000455183 2001 ntBASIC19.49■□□□□ 0.71
MMP8P22894 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.49■□□□□ 0.71
MMP8P22894 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MMP8P22894 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP8P22894 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
MMP8P22894 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.48■□□□□ 0.71
MMP8P22894 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.48■□□□□ 0.71
MMP8P22894 AL512604.3-201ENST00000569583 964 ntBASIC19.48■□□□□ 0.71
MMP8P22894 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP8P22894 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MMP8P22894 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP8P22894 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MMP8P22894 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 KRT18P22-201ENST00000402024 1347 ntBASIC19.48■□□□□ 0.71
MMP8P22894 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP8P22894 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MMP8P22894 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 MIR149-201ENST00000384879 89 ntBASIC19.47■□□□□ 0.71
MMP8P22894 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms