Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC31.7■■■□□ 2.66
CFTRP13569 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC31.7■■■□□ 2.66
CFTRP13569 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
CFTRP13569 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
CFTRP13569 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
CFTRP13569 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC31.7■■■□□ 2.66
CFTRP13569 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC31.7■■■□□ 2.66
CFTRP13569 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC31.69■■■□□ 2.66
CFTRP13569 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CFTRP13569 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC31.69■■■□□ 2.66
CFTRP13569 HS6ST1P1-201ENST00000481504 1234 ntBASIC31.69■■■□□ 2.66
CFTRP13569 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC31.69■■■□□ 2.66
CFTRP13569 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFTRP13569 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFTRP13569 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC31.68■■■□□ 2.66
CFTRP13569 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC31.68■■■□□ 2.66
CFTRP13569 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC31.68■■■□□ 2.66
CFTRP13569 COX5A-204ENST00000567270 579 ntTSL 3 BASIC31.68■■■□□ 2.66
CFTRP13569 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFTRP13569 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFTRP13569 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC31.67■■■□□ 2.66
CFTRP13569 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC31.67■■■□□ 2.66
CFTRP13569 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC31.67■■■□□ 2.66
CFTRP13569 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
CFTRP13569 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFTRP13569 AL356309.3-201ENST00000624132 1934 ntBASIC31.67■■■□□ 2.66
CFTRP13569 UROS-202ENST00000368778 1556 ntTSL 2 BASIC31.66■■■□□ 2.66
CFTRP13569 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CFTRP13569 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFTRP13569 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFTRP13569 MIR149-201ENST00000384879 89 ntBASIC31.66■■■□□ 2.66
CFTRP13569 DNAJB3-202ENST00000449667 1266 ntBASIC31.66■■■□□ 2.66
CFTRP13569 AC107918.4-202ENST00000641623 219 ntBASIC31.66■■■□□ 2.66
CFTRP13569 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC31.66■■■□□ 2.66
CFTRP13569 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC31.66■■■□□ 2.66
CFTRP13569 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CFTRP13569 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFTRP13569 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFTRP13569 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CFTRP13569 COA5-202ENST00000409997 557 ntTSL 4 BASIC31.65■■■□□ 2.66
CFTRP13569 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC31.65■■■□□ 2.66
CFTRP13569 UNC93B6-202ENST00000528242 690 ntBASIC31.65■■■□□ 2.66
CFTRP13569 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC31.65■■■□□ 2.66
CFTRP13569 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC31.65■■■□□ 2.66
CFTRP13569 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 NFYC-AS1-201ENST00000606277 1687 ntBASIC31.65■■■□□ 2.66
CFTRP13569 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
CFTRP13569 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC31.65■■■□□ 2.66
CFTRP13569 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CFTRP13569 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC31.65■■■□□ 2.66
CFTRP13569 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFTRP13569 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CFTRP13569 CENPM-204ENST00000402420 688 ntTSL 5 BASIC31.64■■■□□ 2.66
CFTRP13569 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC31.64■■■□□ 2.66
CFTRP13569 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFTRP13569 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFTRP13569 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFTRP13569 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFTRP13569 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
CFTRP13569 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.65
CFTRP13569 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
CFTRP13569 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC31.64■■■□□ 2.65
CFTRP13569 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CFTRP13569 AC141586.3-201ENST00000562166 1838 ntBASIC31.63■■■□□ 2.65
CFTRP13569 AL024508.2-201ENST00000607749 1894 ntBASIC31.63■■■□□ 2.65
CFTRP13569 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 AP002414.3-201ENST00000589352 1468 ntBASIC31.63■■■□□ 2.65
CFTRP13569 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC31.63■■■□□ 2.65
CFTRP13569 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC31.63■■■□□ 2.65
CFTRP13569 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC31.63■■■□□ 2.65
CFTRP13569 AC008687.5-201ENST00000593746 558 ntBASIC31.63■■■□□ 2.65
CFTRP13569 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.63■■■□□ 2.65
CFTRP13569 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFTRP13569 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC31.62■■■□□ 2.65
CFTRP13569 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC31.62■■■□□ 2.65
CFTRP13569 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
CFTRP13569 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms