Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SRFP11831 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SRFP11831 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFP11831 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFP11831 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SRFP11831 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFP11831 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFP11831 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.73■□□□□ 0.59
SRFP11831 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFP11831 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.72■□□□□ 0.59
SRFP11831 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.72■□□□□ 0.59
SRFP11831 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.72■□□□□ 0.59
SRFP11831 AC098831.1-202ENST00000438821 336 ntBASIC18.72■□□□□ 0.59
SRFP11831 AL591424.1-201ENST00000442569 1213 ntBASIC18.72■□□□□ 0.59
SRFP11831 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.72■□□□□ 0.59
SRFP11831 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFP11831 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFP11831 AL356488.2-201ENST00000602755 427 ntBASIC18.72■□□□□ 0.59
SRFP11831 AC140113.2-201ENST00000604370 208 ntBASIC18.72■□□□□ 0.59
SRFP11831 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.72■□□□□ 0.59
SRFP11831 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.72■□□□□ 0.59
SRFP11831 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.72■□□□□ 0.59
SRFP11831 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFP11831 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 KRT18P41-201ENST00000518924 1277 ntBASIC18.71■□□□□ 0.59
SRFP11831 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 AC021087.4-201ENST00000563761 564 ntBASIC18.71■□□□□ 0.59
SRFP11831 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.71■□□□□ 0.59
SRFP11831 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.71■□□□□ 0.59
SRFP11831 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFP11831 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFP11831 HLA-J-201ENST00000462773 1622 ntBASIC18.71■□□□□ 0.58
SRFP11831 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SRFP11831 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 INTS4P1-201ENST00000438455 1935 ntBASIC18.7■□□□□ 0.58
SRFP11831 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
SRFP11831 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SRFP11831 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.7■□□□□ 0.58
SRFP11831 AC112907.3-201ENST00000577781 2400 ntBASIC18.7■□□□□ 0.58
SRFP11831 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 HMGN1P19-201ENST00000436976 333 ntBASIC18.7■□□□□ 0.58
SRFP11831 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.7■□□□□ 0.58
SRFP11831 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.7■□□□□ 0.58
SRFP11831 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.7■□□□□ 0.58
SRFP11831 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.7■□□□□ 0.58
SRFP11831 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFP11831 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.69■□□□□ 0.58
SRFP11831 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRFP11831 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.69■□□□□ 0.58
SRFP11831 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRFP11831 AP005117.1-201ENST00000584346 1413 ntBASIC18.69■□□□□ 0.58
SRFP11831 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFP11831 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.69■□□□□ 0.58
SRFP11831 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.69■□□□□ 0.58
SRFP11831 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.69■□□□□ 0.58
SRFP11831 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.69■□□□□ 0.58
SRFP11831 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
SRFP11831 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.69■□□□□ 0.58
SRFP11831 AC068472.1-201ENST00000474589 881 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms