Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LAMP1P11279 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LAMP1P11279 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LAMP1P11279 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMP1P11279 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.6■□□□□ 0.41
LAMP1P11279 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.6■□□□□ 0.41
LAMP1P11279 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.6■□□□□ 0.41
LAMP1P11279 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMP1P11279 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.6■□□□□ 0.41
LAMP1P11279 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMP1P11279 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMP1P11279 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LAMP1P11279 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.59■□□□□ 0.41
LAMP1P11279 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 MIR564-202ENST00000385049 94 ntBASIC17.59■□□□□ 0.41
LAMP1P11279 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.59■□□□□ 0.41
LAMP1P11279 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 REXO1L10P-201ENST00000615707 1290 ntBASIC17.59■□□□□ 0.41
LAMP1P11279 REXO1L12P-201ENST00000622156 912 ntBASIC17.59■□□□□ 0.41
LAMP1P11279 AL049637.2-201ENST00000641778 930 ntBASIC17.59■□□□□ 0.41
LAMP1P11279 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LAMP1P11279 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LAMP1P11279 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LAMP1P11279 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LAMP1P11279 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.58■□□□□ 0.41
LAMP1P11279 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LAMP1P11279 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LAMP1P11279 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LAMP1P11279 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.58■□□□□ 0.41
LAMP1P11279 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.58■□□□□ 0.4
LAMP1P11279 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LAMP1P11279 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.58■□□□□ 0.4
LAMP1P11279 AC012618.2-201ENST00000428058 849 ntBASIC17.58■□□□□ 0.4
LAMP1P11279 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.58■□□□□ 0.4
LAMP1P11279 ESPNP-201ENST00000270691 2015 ntBASIC17.58■□□□□ 0.4
LAMP1P11279 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
LAMP1P11279 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
LAMP1P11279 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.58■□□□□ 0.4
LAMP1P11279 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LAMP1P11279 AC093677.2-201ENST00000600169 1863 ntBASIC17.58■□□□□ 0.4
LAMP1P11279 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LAMP1P11279 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
LAMP1P11279 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LAMP1P11279 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
LAMP1P11279 LETM1P2-201ENST00000597330 2178 ntBASIC17.57■□□□□ 0.4
LAMP1P11279 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LAMP1P11279 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LAMP1P11279 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.57■□□□□ 0.4
LAMP1P11279 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 MCCD1P1-208ENST00000445732 328 ntBASIC17.57■□□□□ 0.4
LAMP1P11279 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.57■□□□□ 0.4
LAMP1P11279 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.57■□□□□ 0.4
LAMP1P11279 AP001412.1-201ENST00000608405 714 ntBASIC17.57■□□□□ 0.4
LAMP1P11279 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.57■□□□□ 0.4
LAMP1P11279 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.57■□□□□ 0.4
LAMP1P11279 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LAMP1P11279 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.57■□□□□ 0.4
LAMP1P11279 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.56■□□□□ 0.4
LAMP1P11279 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LAMP1P11279 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
LAMP1P11279 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LAMP1P11279 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LAMP1P11279 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms