Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRNB1P11230 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CHRNB1P11230 MIR574-201ENST00000385209 96 ntBASIC18.78■□□□□ 0.6
CHRNB1P11230 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRNB1P11230 AP001005.1-201ENST00000571755 1248 ntBASIC18.78■□□□□ 0.6
CHRNB1P11230 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRNB1P11230 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRNB1P11230 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNB1P11230 AL353692.3-201ENST00000407031 1396 ntBASIC18.78■□□□□ 0.6
CHRNB1P11230 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CHRNB1P11230 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNB1P11230 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 PMS2P1-201ENST00000431037 1228 ntBASIC18.77■□□□□ 0.6
CHRNB1P11230 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.77■□□□□ 0.6
CHRNB1P11230 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNB1P11230 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHRNB1P11230 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNB1P11230 AC139530.3-201ENST00000620344 690 ntBASIC18.77■□□□□ 0.6
CHRNB1P11230 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHRNB1P11230 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.77■□□□□ 0.6
CHRNB1P11230 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNB1P11230 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNB1P11230 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNB1P11230 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNB1P11230 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.77■□□□□ 0.59
CHRNB1P11230 FEM1AP3-201ENST00000403722 1741 ntBASIC18.77■□□□□ 0.59
CHRNB1P11230 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
CHRNB1P11230 AC112907.3-201ENST00000577781 2400 ntBASIC18.76■□□□□ 0.59
CHRNB1P11230 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNB1P11230 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNB1P11230 IL9RP2-201ENST00000423948 1312 ntBASIC18.76■□□□□ 0.59
CHRNB1P11230 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHRNB1P11230 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNB1P11230 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNB1P11230 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNB1P11230 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNB1P11230 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNB1P11230 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 KRT89P-201ENST00000620027 1478 ntBASIC18.76■□□□□ 0.59
CHRNB1P11230 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNB1P11230 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNB1P11230 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
CHRNB1P11230 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHRNB1P11230 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CHRNB1P11230 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHRNB1P11230 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 POM121L3P-201ENST00000419331 1163 ntBASIC18.75■□□□□ 0.59
CHRNB1P11230 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNB1P11230 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNB1P11230 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNB1P11230 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNB1P11230 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 AL773604.1-201ENST00000617417 272 ntBASIC18.75■□□□□ 0.59
CHRNB1P11230 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNB1P11230 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNB1P11230 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNB1P11230 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHRNB1P11230 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNB1P11230 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRNB1P11230 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNB1P11230 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNB1P11230 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHRNB1P11230 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.74■□□□□ 0.59
CHRNB1P11230 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNB1P11230 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNB1P11230 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms