Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
CD28P10747 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.5□□□□□ -0.09
CD28P10747 HLA-F-220ENST00000434407 884 ntBASIC14.5□□□□□ -0.09
CD28P10747 TPM4P1-201ENST00000436100 807 ntBASIC14.5□□□□□ -0.09
CD28P10747 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.5□□□□□ -0.09
CD28P10747 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.5□□□□□ -0.09
CD28P10747 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 MIR3652-201ENST00000579335 131 ntBASIC14.5□□□□□ -0.09
CD28P10747 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.5□□□□□ -0.09
CD28P10747 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.5□□□□□ -0.09
CD28P10747 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CD28P10747 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD28P10747 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD28P10747 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD28P10747 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.49□□□□□ -0.09
CD28P10747 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.49□□□□□ -0.09
CD28P10747 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 PRELID1P1-202ENST00000567272 903 ntBASIC14.49□□□□□ -0.09
CD28P10747 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD28P10747 AC010240.3-201ENST00000607688 395 ntBASIC14.49□□□□□ -0.09
CD28P10747 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD28P10747 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.49□□□□□ -0.09
CD28P10747 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD28P10747 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD28P10747 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 MIR564-202ENST00000385049 94 ntBASIC14.48□□□□□ -0.09
CD28P10747 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD28P10747 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.48□□□□□ -0.09
CD28P10747 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.48□□□□□ -0.09
CD28P10747 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.48□□□□□ -0.09
CD28P10747 AC104390.1-201ENST00000555663 520 ntBASIC14.48□□□□□ -0.09
CD28P10747 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.48□□□□□ -0.09
CD28P10747 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 AL691432.3-201ENST00000621860 400 ntBASIC14.48□□□□□ -0.09
CD28P10747 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.48□□□□□ -0.09
CD28P10747 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms