Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CD48P09326 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 AC034236.2-201ENST00000606662 1610 ntBASIC19.23■□□□□ 0.67
CD48P09326 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.23■□□□□ 0.67
CD48P09326 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.23■□□□□ 0.67
CD48P09326 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.23■□□□□ 0.67
CD48P09326 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 ESPNP-201ENST00000270691 2015 ntBASIC19.23■□□□□ 0.67
CD48P09326 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.23■□□□□ 0.67
CD48P09326 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CD48P09326 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD48P09326 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.22■□□□□ 0.67
CD48P09326 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.22■□□□□ 0.67
CD48P09326 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.22■□□□□ 0.67
CD48P09326 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 CCR12P-201ENST00000446203 998 ntBASIC19.22■□□□□ 0.67
CD48P09326 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.22■□□□□ 0.67
CD48P09326 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.22■□□□□ 0.67
CD48P09326 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD48P09326 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.22■□□□□ 0.67
CD48P09326 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD48P09326 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD48P09326 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 AL133373.2-201ENST00000623187 2828 ntBASIC19.21■□□□□ 0.67
CD48P09326 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.21■□□□□ 0.67
CD48P09326 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD48P09326 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
CD48P09326 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.21■□□□□ 0.67
CD48P09326 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.21■□□□□ 0.67
CD48P09326 C2orf69P3-201ENST00000565542 1120 ntBASIC19.21■□□□□ 0.67
CD48P09326 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CD48P09326 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CD48P09326 AC116562.4-202ENST00000641738 218 ntBASIC19.21■□□□□ 0.67
CD48P09326 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 ABALON-201ENST00000629058 1903 ntBASIC19.21■□□□□ 0.67
CD48P09326 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD48P09326 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
CD48P09326 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CD48P09326 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.21■□□□□ 0.67
CD48P09326 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.2■□□□□ 0.66
CD48P09326 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CD48P09326 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
CD48P09326 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.2■□□□□ 0.66
CD48P09326 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CD48P09326 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.2■□□□□ 0.66
CD48P09326 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 BX088651.1-201ENST00000540551 451 ntBASIC19.2■□□□□ 0.66
CD48P09326 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CD48P09326 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.2■□□□□ 0.66
CD48P09326 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CD48P09326 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
CD48P09326 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.2■□□□□ 0.66
CD48P09326 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD48P09326 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms