Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.51■□□□□ 0.39
MT-ND1P03886 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MT-ND1P03886 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND1P03886 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND1P03886 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND1P03886 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MT-ND1P03886 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 RCC2P6-201ENST00000526625 1557 ntBASIC17.5■□□□□ 0.39
MT-ND1P03886 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND1P03886 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND1P03886 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MT-ND1P03886 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND1P03886 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND1P03886 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND1P03886 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MT-ND1P03886 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.49■□□□□ 0.39
MT-ND1P03886 POM121L13P-201ENST00000422362 380 ntBASIC17.49■□□□□ 0.39
MT-ND1P03886 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MT-ND1P03886 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 UNC93B5-201ENST00000530315 699 ntBASIC17.49■□□□□ 0.39
MT-ND1P03886 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 REXO1L9P-201ENST00000604264 2108 ntBASIC17.49■□□□□ 0.39
MT-ND1P03886 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.49■□□□□ 0.39
MT-ND1P03886 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND1P03886 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MT-ND1P03886 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND1P03886 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND1P03886 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MT-ND1P03886 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-ND1P03886 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-ND1P03886 AC080080.1-201ENST00000625121 2420 ntBASIC17.48■□□□□ 0.39
MT-ND1P03886 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms