Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.94■□□□□ 0.78
HLA-DRAP01903 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 AC090164.3-201ENST00000610780 2143 ntBASIC19.94■□□□□ 0.78
HLA-DRAP01903 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DRAP01903 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DRAP01903 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 AP000523.1-201ENST00000398242 1049 ntBASIC19.93■□□□□ 0.78
HLA-DRAP01903 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DRAP01903 AC099343.3-201ENST00000605834 2503 ntBASIC19.93■□□□□ 0.78
HLA-DRAP01903 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DRAP01903 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 AL163051.1-201ENST00000569214 1512 ntBASIC19.92■□□□□ 0.78
HLA-DRAP01903 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 RCN1P1-201ENST00000400413 996 ntBASIC19.92■□□□□ 0.78
HLA-DRAP01903 BX664615.1-201ENST00000443558 458 ntBASIC19.92■□□□□ 0.78
HLA-DRAP01903 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 COX11P1-201ENST00000489116 835 ntBASIC19.92■□□□□ 0.78
HLA-DRAP01903 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DRAP01903 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DRAP01903 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms