Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN1O95832 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN1O95832 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
CLDN1O95832 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN1O95832 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN1O95832 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 BX842568.4-201ENST00000421222 227 ntBASIC16.53■□□□□ 0.24
CLDN1O95832 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 SEC1P-202ENST00000473944 940 ntBASIC16.53■□□□□ 0.24
CLDN1O95832 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLDN1O95832 AF238378.1-201ENST00000526806 358 ntBASIC16.53■□□□□ 0.24
CLDN1O95832 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN1O95832 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN1O95832 AL773604.1-201ENST00000617417 272 ntBASIC16.53■□□□□ 0.24
CLDN1O95832 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN1O95832 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CLDN1O95832 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLDN1O95832 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN1O95832 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN1O95832 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN1O95832 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN1O95832 AC036111.1-201ENST00000533973 1582 ntBASIC16.52■□□□□ 0.24
CLDN1O95832 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 PMS2P7-201ENST00000506558 1336 ntBASIC16.52■□□□□ 0.24
CLDN1O95832 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN1O95832 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN1O95832 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CLDN1O95832 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN1O95832 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN1O95832 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN1O95832 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN1O95832 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLDN1O95832 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN1O95832 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 AL355385.1-201ENST00000606123 409 ntBASIC16.52■□□□□ 0.24
CLDN1O95832 REXO1L6P-202ENST00000619970 1078 ntBASIC16.52■□□□□ 0.24
CLDN1O95832 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN1O95832 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN1O95832 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN1O95832 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN1O95832 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CLDN1O95832 GPAT2P1-201ENST00000444924 1672 ntBASIC16.52■□□□□ 0.23
CLDN1O95832 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN1O95832 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CLDN1O95832 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CLDN1O95832 AC233702.3-201ENST00000578656 1387 ntBASIC16.51■□□□□ 0.23
CLDN1O95832 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN1O95832 AC120498.9-201ENST00000339021 3867 ntBASIC16.51■□□□□ 0.23
CLDN1O95832 AC022898.2-201ENST00000616822 1312 ntBASIC16.51■□□□□ 0.23
CLDN1O95832 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN1O95832 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN1O95832 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN1O95832 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms