Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CNOT4O95628 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 AC036111.1-201ENST00000533973 1582 ntBASIC16.48■□□□□ 0.23
CNOT4O95628 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT4O95628 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.48■□□□□ 0.23
CNOT4O95628 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 MIR564-202ENST00000385049 94 ntBASIC16.48■□□□□ 0.23
CNOT4O95628 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.48■□□□□ 0.23
CNOT4O95628 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.48■□□□□ 0.23
CNOT4O95628 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT4O95628 AC011558.1-201ENST00000623459 338 ntBASIC16.48■□□□□ 0.23
CNOT4O95628 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNOT4O95628 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT4O95628 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNOT4O95628 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT4O95628 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT4O95628 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT4O95628 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT4O95628 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT4O95628 AC034232.1-201ENST00000506026 1064 ntBASIC16.47■□□□□ 0.23
CNOT4O95628 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT4O95628 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CNOT4O95628 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT4O95628 AC083906.6-201ENST00000641366 219 ntBASIC16.47■□□□□ 0.23
CNOT4O95628 AC034236.2-201ENST00000606662 1610 ntBASIC16.47■□□□□ 0.23
CNOT4O95628 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT4O95628 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT4O95628 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CNOT4O95628 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 HEIH-201ENST00000623091 1652 ntBASIC16.46■□□□□ 0.23
CNOT4O95628 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CNOT4O95628 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 AL161938.1-201ENST00000569833 2180 ntBASIC16.46■□□□□ 0.23
CNOT4O95628 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 AC092647.4-201ENST00000457211 535 ntBASIC16.46■□□□□ 0.23
CNOT4O95628 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms