Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD1O75127 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PTCD1O75127 AC007952.6-201ENST00000573168 2673 ntBASIC23.78■■□□□ 1.4
PTCD1O75127 AC003957.1-201ENST00000625108 2673 ntBASIC23.78■■□□□ 1.4
PTCD1O75127 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PTCD1O75127 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD1O75127 AF238378.1-201ENST00000526806 358 ntBASIC23.78■■□□□ 1.4
PTCD1O75127 AL662844.1-201ENST00000546340 181 ntBASIC23.78■■□□□ 1.4
PTCD1O75127 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD1O75127 AC023511.2-201ENST00000618803 211 ntBASIC23.78■■□□□ 1.4
PTCD1O75127 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.78■■□□□ 1.4
PTCD1O75127 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTCD1O75127 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTCD1O75127 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD1O75127 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PTCD1O75127 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD1O75127 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PTCD1O75127 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.77■■□□□ 1.4
PTCD1O75127 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.77■■□□□ 1.4
PTCD1O75127 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.77■■□□□ 1.4
PTCD1O75127 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD1O75127 AC004263.2-201ENST00000617183 678 ntBASIC23.77■■□□□ 1.4
PTCD1O75127 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD1O75127 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD1O75127 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PTCD1O75127 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.77■■□□□ 1.4
PTCD1O75127 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCD1O75127 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 SAPCD2P3-201ENST00000455031 850 ntBASIC23.76■■□□□ 1.39
PTCD1O75127 VENTXP7-201ENST00000475503 772 ntBASIC23.76■■□□□ 1.39
PTCD1O75127 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PTCD1O75127 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCD1O75127 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCD1O75127 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 REXO1L6P-202ENST00000619970 1078 ntBASIC23.76■■□□□ 1.39
PTCD1O75127 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 AL032819.2-201ENST00000624543 2162 ntBASIC23.76■■□□□ 1.39
PTCD1O75127 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PTCD1O75127 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
PTCD1O75127 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PTCD1O75127 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.76■■□□□ 1.39
PTCD1O75127 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD1O75127 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.75■■□□□ 1.39
PTCD1O75127 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PTCD1O75127 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.75■■□□□ 1.39
PTCD1O75127 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PTCD1O75127 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PTCD1O75127 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PTCD1O75127 MINOS1P3-201ENST00000457048 203 ntBASIC23.75■■□□□ 1.39
PTCD1O75127 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.75■■□□□ 1.39
PTCD1O75127 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.75■■□□□ 1.39
PTCD1O75127 AC011840.4-201ENST00000578471 627 ntBASIC23.75■■□□□ 1.39
PTCD1O75127 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.75■■□□□ 1.39
PTCD1O75127 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PTCD1O75127 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.75■■□□□ 1.39
PTCD1O75127 HEIH-201ENST00000623091 1652 ntBASIC23.75■■□□□ 1.39
PTCD1O75127 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PTCD1O75127 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD1O75127 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PTCD1O75127 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD1O75127 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.74■■□□□ 1.39
PTCD1O75127 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
PTCD1O75127 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.74■■□□□ 1.39
PTCD1O75127 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD1O75127 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD1O75127 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD1O75127 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.74■■□□□ 1.39
PTCD1O75127 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PTCD1O75127 TP73-AS1-207ENST00000624167 988 ntBASIC23.74■■□□□ 1.39
PTCD1O75127 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms