Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HCN1O60741 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 AL390961.4-201ENST00000623958 2535 ntBASIC17.36■□□□□ 0.37
HCN1O60741 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.35■□□□□ 0.37
HCN1O60741 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 HMGA1P5-201ENST00000412453 271 ntBASIC17.35■□□□□ 0.37
HCN1O60741 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.35■□□□□ 0.37
HCN1O60741 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HCN1O60741 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.35■□□□□ 0.37
HCN1O60741 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCN1O60741 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.35■□□□□ 0.37
HCN1O60741 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HCN1O60741 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 FEM1AP3-201ENST00000403722 1741 ntBASIC17.35■□□□□ 0.37
HCN1O60741 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 Z98044.1-201ENST00000632503 1764 ntBASIC17.35■□□□□ 0.37
HCN1O60741 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCN1O60741 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HCN1O60741 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCN1O60741 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HCN1O60741 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
HCN1O60741 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 KRT18P57-201ENST00000443599 1254 ntBASIC17.34■□□□□ 0.37
HCN1O60741 TSPY17P-201ENST00000450329 467 ntBASIC17.34■□□□□ 0.37
HCN1O60741 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 PRSS44-201ENST00000515154 1146 ntBASIC17.34■□□□□ 0.37
HCN1O60741 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 AL031598.1-201ENST00000561511 1773 ntBASIC17.34■□□□□ 0.37
HCN1O60741 CKBP1-201ENST00000565489 1086 ntBASIC17.34■□□□□ 0.37
HCN1O60741 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.34■□□□□ 0.37
HCN1O60741 FAM87A-204ENST00000613235 858 ntBASIC17.34■□□□□ 0.37
HCN1O60741 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HCN1O60741 AL590326.2-201ENST00000625139 305 ntBASIC17.34■□□□□ 0.37
HCN1O60741 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCN1O60741 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.33■□□□□ 0.37
HCN1O60741 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
HCN1O60741 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.33■□□□□ 0.37
HCN1O60741 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.37
HCN1O60741 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HCN1O60741 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HCN1O60741 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.33■□□□□ 0.37
HCN1O60741 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCN1O60741 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HCN1O60741 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCN1O60741 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.33■□□□□ 0.36
HCN1O60741 AL049597.2-201ENST00000565575 961 ntBASIC17.33■□□□□ 0.36
HCN1O60741 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.33■□□□□ 0.36
HCN1O60741 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCN1O60741 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCN1O60741 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.33■□□□□ 0.36
HCN1O60741 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCN1O60741 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCN1O60741 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HCN1O60741 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.32■□□□□ 0.36
HCN1O60741 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.32■□□□□ 0.36
HCN1O60741 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms