Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 AC104417.2-201ENST00000562989 1793 ntBASIC17.96■□□□□ 0.47
GFRA3O60609 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GFRA3O60609 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.96■□□□□ 0.47
GFRA3O60609 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.96■□□□□ 0.47
GFRA3O60609 AP000344.2-201ENST00000512987 629 ntBASIC17.96■□□□□ 0.47
GFRA3O60609 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.96■□□□□ 0.47
GFRA3O60609 AC025678.2-201ENST00000562061 970 ntBASIC17.96■□□□□ 0.47
GFRA3O60609 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GFRA3O60609 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
GFRA3O60609 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
GFRA3O60609 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
GFRA3O60609 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GFRA3O60609 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.95■□□□□ 0.46
GFRA3O60609 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.95■□□□□ 0.46
GFRA3O60609 RCC2P3-201ENST00000418112 1537 ntBASIC17.95■□□□□ 0.46
GFRA3O60609 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GFRA3O60609 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.95■□□□□ 0.46
GFRA3O60609 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.95■□□□□ 0.46
GFRA3O60609 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.95■□□□□ 0.46
GFRA3O60609 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.95■□□□□ 0.46
GFRA3O60609 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.95■□□□□ 0.46
GFRA3O60609 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.95■□□□□ 0.46
GFRA3O60609 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
GFRA3O60609 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
GFRA3O60609 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GFRA3O60609 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GFRA3O60609 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
GFRA3O60609 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
GFRA3O60609 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.94■□□□□ 0.46
GFRA3O60609 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.94■□□□□ 0.46
GFRA3O60609 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GFRA3O60609 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.94■□□□□ 0.46
GFRA3O60609 AL031432.2-201ENST00000566714 459 ntBASIC17.94■□□□□ 0.46
GFRA3O60609 AL928711.1-201ENST00000570165 459 ntBASIC17.94■□□□□ 0.46
GFRA3O60609 AC011467.2-201ENST00000598425 242 ntBASIC17.94■□□□□ 0.46
GFRA3O60609 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GFRA3O60609 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GFRA3O60609 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
GFRA3O60609 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.94■□□□□ 0.46
GFRA3O60609 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
GFRA3O60609 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GFRA3O60609 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.94■□□□□ 0.46
GFRA3O60609 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.94■□□□□ 0.46
GFRA3O60609 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
GFRA3O60609 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GFRA3O60609 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.93■□□□□ 0.46
GFRA3O60609 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 FAM86GP-201ENST00000448322 971 ntBASIC17.93■□□□□ 0.46
GFRA3O60609 INGX-202ENST00000489074 768 ntBASIC17.93■□□□□ 0.46
GFRA3O60609 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.93■□□□□ 0.46
GFRA3O60609 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms