Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3BO60391 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.55■■□□□ 1.2
GRIN3BO60391 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3BO60391 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.55■■□□□ 1.2
GRIN3BO60391 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.55■■□□□ 1.2
GRIN3BO60391 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3BO60391 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.55■■□□□ 1.2
GRIN3BO60391 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
GRIN3BO60391 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3BO60391 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.54■■□□□ 1.2
GRIN3BO60391 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.54■■□□□ 1.2
GRIN3BO60391 MKNK2P1-201ENST00000437526 628 ntBASIC22.54■■□□□ 1.2
GRIN3BO60391 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.54■■□□□ 1.2
GRIN3BO60391 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.54■■□□□ 1.2
GRIN3BO60391 AC011467.2-201ENST00000598425 242 ntBASIC22.54■■□□□ 1.2
GRIN3BO60391 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.54■■□□□ 1.2
GRIN3BO60391 AL512353.2-201ENST00000448759 1962 ntBASIC22.54■■□□□ 1.2
GRIN3BO60391 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.54■■□□□ 1.2
GRIN3BO60391 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GRIN3BO60391 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GRIN3BO60391 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GRIN3BO60391 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 LAGE3P1-201ENST00000425356 484 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 PRSS29P-201ENST00000440800 595 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.53■■□□□ 1.2
GRIN3BO60391 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.53■■□□□ 1.2
GRIN3BO60391 AF228730.6-201ENST00000641497 218 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 AC084121.3-201ENST00000641716 218 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 AC105233.6-201ENST00000642093 218 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
GRIN3BO60391 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.53■■□□□ 1.2
GRIN3BO60391 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
GRIN3BO60391 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.53■■□□□ 1.2
GRIN3BO60391 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GRIN3BO60391 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
GRIN3BO60391 AC006333.2-201ENST00000607957 2099 ntBASIC22.53■■□□□ 1.2
GRIN3BO60391 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.52■■□□□ 1.2
GRIN3BO60391 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.52■■□□□ 1.2
GRIN3BO60391 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
GRIN3BO60391 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.52■■□□□ 1.2
GRIN3BO60391 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.52■■□□□ 1.2
GRIN3BO60391 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.52■■□□□ 1.2
GRIN3BO60391 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
GRIN3BO60391 AC093028.1-201ENST00000622998 982 ntBASIC22.52■■□□□ 1.2
GRIN3BO60391 PGM5P2-202ENST00000637225 1043 ntBASIC22.52■■□□□ 1.2
GRIN3BO60391 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.52■■□□□ 1.2
GRIN3BO60391 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
GRIN3BO60391 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.52■■□□□ 1.19
GRIN3BO60391 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.51■■□□□ 1.19
GRIN3BO60391 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.51■■□□□ 1.19
GRIN3BO60391 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.51■■□□□ 1.19
GRIN3BO60391 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
GRIN3BO60391 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.51■■□□□ 1.19
GRIN3BO60391 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.51■■□□□ 1.19
GRIN3BO60391 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 KRT18P2-201ENST00000447938 1258 ntBASIC22.51■■□□□ 1.19
GRIN3BO60391 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.51■■□□□ 1.19
GRIN3BO60391 MIR4745-201ENST00000577608 62 ntBASIC22.51■■□□□ 1.19
GRIN3BO60391 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.51■■□□□ 1.19
GRIN3BO60391 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.51■■□□□ 1.19
GRIN3BO60391 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GRIN3BO60391 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GRIN3BO60391 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.5■■□□□ 1.19
GRIN3BO60391 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.5■■□□□ 1.19
GRIN3BO60391 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GRIN3BO60391 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GRIN3BO60391 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GRIN3BO60391 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms