Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 AC079834.2-201ENST00000609776 1949 ntBASIC17.5■□□□□ 0.39
URB1O60287 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 RPSAP43-201ENST00000402237 625 ntBASIC17.5■□□□□ 0.39
URB1O60287 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.5■□□□□ 0.39
URB1O60287 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
URB1O60287 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
URB1O60287 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.49■□□□□ 0.39
URB1O60287 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.49■□□□□ 0.39
URB1O60287 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.49■□□□□ 0.39
URB1O60287 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.49■□□□□ 0.39
URB1O60287 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.49■□□□□ 0.39
URB1O60287 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.49■□□□□ 0.39
URB1O60287 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
URB1O60287 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.49■□□□□ 0.39
URB1O60287 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.49■□□□□ 0.39
URB1O60287 HNRNPDP1-201ENST00000439535 754 ntBASIC17.49■□□□□ 0.39
URB1O60287 MCCD1P1-208ENST00000445732 328 ntBASIC17.49■□□□□ 0.39
URB1O60287 IGHV3-22-201ENST00000520721 359 ntBASIC17.49■□□□□ 0.39
URB1O60287 IGHV3-41-201ENST00000613121 348 ntBASIC17.49■□□□□ 0.39
URB1O60287 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.49■□□□□ 0.39
URB1O60287 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
URB1O60287 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.48■□□□□ 0.39
URB1O60287 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.48■□□□□ 0.39
URB1O60287 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.48■□□□□ 0.39
URB1O60287 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
URB1O60287 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 NUS1P2-201ENST00000417358 873 ntBASIC17.48■□□□□ 0.39
URB1O60287 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.48■□□□□ 0.39
URB1O60287 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.48■□□□□ 0.39
URB1O60287 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.48■□□□□ 0.39
URB1O60287 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
URB1O60287 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
URB1O60287 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
URB1O60287 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.47■□□□□ 0.39
URB1O60287 YBX2P1-201ENST00000394192 760 ntBASIC17.47■□□□□ 0.39
URB1O60287 POM121L3P-201ENST00000419331 1163 ntBASIC17.47■□□□□ 0.39
URB1O60287 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
URB1O60287 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.47■□□□□ 0.39
URB1O60287 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.47■□□□□ 0.39
URB1O60287 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.47■□□□□ 0.39
URB1O60287 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
URB1O60287 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms