Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 MTDHP1-201ENST00000605323 784 ntBASIC17.04■□□□□ 0.32
IDH3BO43837 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.04■□□□□ 0.32
IDH3BO43837 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 ANO7L1-203ENST00000602586 1720 ntBASIC17.04■□□□□ 0.32
IDH3BO43837 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.03■□□□□ 0.32
IDH3BO43837 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.03■□□□□ 0.32
IDH3BO43837 AP003097.1-201ENST00000530657 1135 ntBASIC17.03■□□□□ 0.32
IDH3BO43837 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.03■□□□□ 0.32
IDH3BO43837 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.03■□□□□ 0.32
IDH3BO43837 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
IDH3BO43837 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IDH3BO43837 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
IDH3BO43837 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.02■□□□□ 0.32
IDH3BO43837 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
IDH3BO43837 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.02■□□□□ 0.32
IDH3BO43837 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IDH3BO43837 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.02■□□□□ 0.32
IDH3BO43837 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 AC092666.2-201ENST00000613287 246 ntBASIC17.02■□□□□ 0.32
IDH3BO43837 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
IDH3BO43837 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.02■□□□□ 0.31
IDH3BO43837 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
IDH3BO43837 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IDH3BO43837 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 KRT8P41-201ENST00000533985 1514 ntBASIC17.01■□□□□ 0.31
IDH3BO43837 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IDH3BO43837 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.01■□□□□ 0.31
IDH3BO43837 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IDH3BO43837 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IDH3BO43837 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.01■□□□□ 0.31
IDH3BO43837 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms