Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.42■□□□□ 0.86
CCP110O43303 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.42■□□□□ 0.86
CCP110O43303 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.42■□□□□ 0.86
CCP110O43303 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.42■□□□□ 0.86
CCP110O43303 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.42■□□□□ 0.86
CCP110O43303 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCP110O43303 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
CCP110O43303 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCP110O43303 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 KRT17P3-201ENST00000420566 1262 ntBASIC20.41■□□□□ 0.86
CCP110O43303 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.41■□□□□ 0.86
CCP110O43303 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.41■□□□□ 0.86
CCP110O43303 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.41■□□□□ 0.86
CCP110O43303 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.41■□□□□ 0.86
CCP110O43303 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.41■□□□□ 0.86
CCP110O43303 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCP110O43303 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCP110O43303 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.41■□□□□ 0.86
CCP110O43303 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCP110O43303 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCP110O43303 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCP110O43303 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.4■□□□□ 0.86
CCP110O43303 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.4■□□□□ 0.86
CCP110O43303 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CCP110O43303 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCP110O43303 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCP110O43303 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CCP110O43303 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCP110O43303 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.4■□□□□ 0.86
CCP110O43303 MTDHP1-201ENST00000605323 784 ntBASIC20.4■□□□□ 0.86
CCP110O43303 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCP110O43303 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CCP110O43303 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.39■□□□□ 0.86
CCP110O43303 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCP110O43303 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.39■□□□□ 0.86
CCP110O43303 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.39■□□□□ 0.86
CCP110O43303 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCP110O43303 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.39■□□□□ 0.85
CCP110O43303 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.39■□□□□ 0.85
CCP110O43303 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 TSPY21P-201ENST00000433481 731 ntBASIC20.39■□□□□ 0.85
CCP110O43303 KRT18P16-201ENST00000510337 1294 ntBASIC20.39■□□□□ 0.85
CCP110O43303 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.39■□□□□ 0.85
CCP110O43303 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.39■□□□□ 0.85
CCP110O43303 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.39■□□□□ 0.85
CCP110O43303 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.39■□□□□ 0.85
CCP110O43303 PRKY-204ENST00000533551 1019 ntBASIC20.39■□□□□ 0.85
CCP110O43303 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.39■□□□□ 0.85
CCP110O43303 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.39■□□□□ 0.85
CCP110O43303 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.39■□□□□ 0.85
CCP110O43303 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCP110O43303 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCP110O43303 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCP110O43303 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms