Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2A1O14983 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2A1O14983 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP2A1O14983 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2A1O14983 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2A1O14983 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2A1O14983 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP2A1O14983 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2A1O14983 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2A1O14983 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2A1O14983 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP2A1O14983 UNC93B7-201ENST00000509439 705 ntBASIC21.22■□□□□ 0.99
ATP2A1O14983 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2A1O14983 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ATP2A1O14983 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ATP2A1O14983 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2A1O14983 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.21■□□□□ 0.99
ATP2A1O14983 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ATP2A1O14983 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP2A1O14983 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2A1O14983 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2A1O14983 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP2A1O14983 LINC00265-3P-201ENST00000447588 903 ntBASIC21.21■□□□□ 0.99
ATP2A1O14983 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP2A1O14983 TOB2P1-201ENST00000469761 992 ntBASIC21.21■□□□□ 0.99
ATP2A1O14983 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.21■□□□□ 0.99
ATP2A1O14983 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP2A1O14983 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
ATP2A1O14983 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP2A1O14983 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2A1O14983 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP2A1O14983 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ATP2A1O14983 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
ATP2A1O14983 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2A1O14983 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP2A1O14983 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2A1O14983 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2A1O14983 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 FAAHP1-202ENST00000446499 1238 ntBASIC21.2■□□□□ 0.98
ATP2A1O14983 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP2A1O14983 RN7SL606P-201ENST00000472779 293 ntBASIC21.2■□□□□ 0.98
ATP2A1O14983 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2A1O14983 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2A1O14983 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
ATP2A1O14983 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2A1O14983 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 AC083906.6-201ENST00000641366 219 ntBASIC21.2■□□□□ 0.98
ATP2A1O14983 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP2A1O14983 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2A1O14983 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2A1O14983 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP2A1O14983 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 AFG3L1P-217ENST00000557444 2447 ntBASIC21.19■□□□□ 0.98
ATP2A1O14983 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2A1O14983 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ATP2A1O14983 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2A1O14983 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2A1O14983 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2A1O14983 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 AP000867.3-201ENST00000524675 377 ntBASIC21.19■□□□□ 0.98
ATP2A1O14983 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP2A1O14983 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2A1O14983 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2A1O14983 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms