Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SCAMP3O14828 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 TSSC2-201ENST00000450217 709 ntBASIC19.17■□□□□ 0.66
SCAMP3O14828 BX276092.5-203ENST00000456199 560 ntBASIC19.17■□□□□ 0.66
SCAMP3O14828 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.17■□□□□ 0.66
SCAMP3O14828 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP3O14828 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP3O14828 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP3O14828 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SCAMP3O14828 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SCAMP3O14828 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 ATP5G2P1-201ENST00000433580 426 ntBASIC19.16■□□□□ 0.66
SCAMP3O14828 AP002383.4-201ENST00000442518 975 ntBASIC19.16■□□□□ 0.66
SCAMP3O14828 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCAMP3O14828 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.16■□□□□ 0.66
SCAMP3O14828 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCAMP3O14828 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCAMP3O14828 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP3O14828 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP3O14828 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.15■□□□□ 0.66
SCAMP3O14828 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.15■□□□□ 0.66
SCAMP3O14828 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.15■□□□□ 0.66
SCAMP3O14828 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.15■□□□□ 0.66
SCAMP3O14828 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.15■□□□□ 0.66
SCAMP3O14828 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP3O14828 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 AL499627.1-201ENST00000569373 2188 ntBASIC19.15■□□□□ 0.66
SCAMP3O14828 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP3O14828 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
SCAMP3O14828 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.66
SCAMP3O14828 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms