Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 AC005181.1-201ENST00000604782 1256 ntBASIC13.1□□□□□ -0.31
LINC01546A6NGU7 AL121832.2-201ENST00000610979 668 ntBASIC13.1□□□□□ -0.31
LINC01546A6NGU7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 DUX4L16-201ENST00000555130 1264 ntBASIC13.09□□□□□ -0.31
LINC01546A6NGU7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 AL162727.3-201ENST00000635661 2787 ntBASIC13.09□□□□□ -0.31
LINC01546A6NGU7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC01546A6NGU7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01546A6NGU7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PCDHB19P-201ENST00000570871 2371 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms