Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 AC104771.1-201ENST00000603335 964 ntBASIC20.08■□□□□ 0.81
CCDC66A2RUB6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC66A2RUB6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 AC133041.1-202ENST00000642053 222 ntBASIC20.07■□□□□ 0.8
CCDC66A2RUB6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC66A2RUB6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 AL512353.2-201ENST00000448759 1962 ntBASIC20.06■□□□□ 0.8
CCDC66A2RUB6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC66A2RUB6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 AC018695.7-201ENST00000624587 2492 ntBASIC20.05■□□□□ 0.8
CCDC66A2RUB6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms