Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 KRT18P67-201ENST00000432816 1264 ntBASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 AL591684.3-201ENST00000605187 298 ntBASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 AL158211.5-201ENST00000623583 2518 ntBASIC19.4■□□□□ 0.7
HCFC2Q9Y5Z7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HCFC2Q9Y5Z7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HCFC2Q9Y5Z7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.39■□□□□ 0.7
HCFC2Q9Y5Z7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.39■□□□□ 0.7
HCFC2Q9Y5Z7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 KRT18P13-201ENST00000400056 1290 ntBASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 AL031284.1-201ENST00000419297 478 ntBASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 Z98044.1-201ENST00000632503 1764 ntBASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC2Q9Y5Z7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 KRT8P50-201ENST00000562022 1438 ntBASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 MIR5100-201ENST00000579544 119 ntBASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC2Q9Y5Z7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 AF186996.4-201ENST00000467186 377 ntBASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 AC096582.2-201ENST00000510860 516 ntBASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 AC148477.8-201ENST00000624298 468 ntBASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC2Q9Y5Z7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms