Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 KRT8P45-201ENST00000414328 1447 ntBASIC18.65■□□□□ 0.58
PKP3Q9Y446 AC112777.1-201ENST00000540175 1423 ntBASIC18.65■□□□□ 0.58
PKP3Q9Y446 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PKP3Q9Y446 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PKP3Q9Y446 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.64■□□□□ 0.58
PKP3Q9Y446 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PKP3Q9Y446 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PKP3Q9Y446 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
PKP3Q9Y446 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP3Q9Y446 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.64■□□□□ 0.57
PKP3Q9Y446 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 LINC01023-201ENST00000606054 436 ntBASIC18.63■□□□□ 0.57
PKP3Q9Y446 AC097493.4-201ENST00000641197 219 ntBASIC18.63■□□□□ 0.57
PKP3Q9Y446 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PKP3Q9Y446 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP3Q9Y446 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 AC211429.1-201ENST00000415277 523 ntBASIC18.62■□□□□ 0.57
PKP3Q9Y446 LIN28AP1-201ENST00000429574 405 ntBASIC18.62■□□□□ 0.57
PKP3Q9Y446 SLC25A3P1-201ENST00000443844 931 ntBASIC18.62■□□□□ 0.57
PKP3Q9Y446 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP3Q9Y446 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP3Q9Y446 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PKP3Q9Y446 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.61■□□□□ 0.57
PKP3Q9Y446 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PKP3Q9Y446 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PKP3Q9Y446 KRT8P7-201ENST00000533003 1432 ntBASIC18.61■□□□□ 0.57
PKP3Q9Y446 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 ATP5G1P1-201ENST00000448724 379 ntBASIC18.61■□□□□ 0.57
PKP3Q9Y446 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 AC012306.2-201ENST00000609350 630 ntBASIC18.61■□□□□ 0.57
PKP3Q9Y446 AC005363.2-201ENST00000618631 242 ntBASIC18.61■□□□□ 0.57
PKP3Q9Y446 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PKP3Q9Y446 WIZP1-201ENST00000531444 2299 ntBASIC18.61■□□□□ 0.57
PKP3Q9Y446 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP3Q9Y446 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms