Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 YBX1P2-201ENST00000489612 999 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 AL441883.1-201ENST00000566170 1045 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 MIR3180-4-201ENST00000582223 153 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 AC010240.3-201ENST00000607688 395 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 AC011558.1-201ENST00000623459 338 ntBASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.2■□□□□ 0.99
PCDHA4Q9UN74 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.2■□□□□ 0.99
PCDHA4Q9UN74 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.2■□□□□ 0.99
PCDHA4Q9UN74 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHA4Q9UN74 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 AC104076.2-201ENST00000448912 469 ntBASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA4Q9UN74 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms