Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 Z82202.1-201ENST00000623446 1880 ntBASIC19.65■□□□□ 0.74
CHD7Q9P2D1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 TCF3P1-201ENST00000423021 1937 ntBASIC19.65■□□□□ 0.74
CHD7Q9P2D1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 CYMP-203ENST00000474680 1263 ntBASIC19.65■□□□□ 0.74
CHD7Q9P2D1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 AC011840.4-201ENST00000578471 627 ntBASIC19.65■□□□□ 0.74
CHD7Q9P2D1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 RPS2P1-201ENST00000434010 821 ntBASIC19.65■□□□□ 0.74
CHD7Q9P2D1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHD7Q9P2D1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 KRT89P-201ENST00000620027 1478 ntBASIC19.64■□□□□ 0.73
CHD7Q9P2D1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 AP006288.1-201ENST00000446065 395 ntBASIC19.64■□□□□ 0.73
CHD7Q9P2D1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.64■□□□□ 0.73
CHD7Q9P2D1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.64■□□□□ 0.73
CHD7Q9P2D1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 AC025062.2-201ENST00000605477 670 ntBASIC19.63■□□□□ 0.73
CHD7Q9P2D1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 RNA5SP415-201ENST00000517246 115 ntBASIC19.63■□□□□ 0.73
CHD7Q9P2D1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD7Q9P2D1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD7Q9P2D1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms