Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 KRT18P16-201ENST00000510337 1294 ntBASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 UNC93B5-201ENST00000530315 699 ntBASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 AC104417.2-201ENST00000562989 1793 ntBASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBFOX1Q9NWB1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RBFOX1Q9NWB1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 ID1-201ENST00000376105 1233 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 POM121L13P-201ENST00000422362 380 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 SLC25A6P5-201ENST00000435663 894 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 TUBB8P6-201ENST00000436895 1288 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 AC080080.1-201ENST00000625121 2420 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 AL645608.8-201ENST00000606034 2086 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 OR6D1P-202ENST00000641007 5290 ntBASIC16.39■□□□□ 0.21
RBFOX1Q9NWB1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 AL139384.1-201ENST00000612143 3047 ntBASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 RNA5SP413-201ENST00000516373 109 ntBASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RBFOX1Q9NWB1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RBFOX1Q9NWB1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms