Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 HEIH-201ENST00000623091 1652 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 RPS2P55-201ENST00000397318 883 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC012618.2-201ENST00000428058 849 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 TSPY21P-201ENST00000433481 731 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC107956.1-201ENST00000494359 873 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC005829.2-201ENST00000571422 1056 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC233702.5-201ENST00000584107 538 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 AC009053.2-201ENST00000563701 2365 ntBASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2LQ9NUG4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AL499627.1-201ENST00000569373 2188 ntBASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCM2LQ9NUG4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms