Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AK4P3-201ENST00000418260 669 ntBASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC117947.1-201ENST00000427448 529 ntBASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 YBX1P2-201ENST00000489612 999 ntBASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 MIR3180-4-201ENST00000582223 153 ntBASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.54■□□□□ 0.4
PRDM9Q9NQV7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRDM9Q9NQV7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 RNF152P1-201ENST00000397754 604 ntBASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 DUX4L26-201ENST00000489078 1255 ntBASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 AL023973.1-201ENST00000624619 620 ntBASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.52■□□□□ 0.4
PRDM9Q9NQV7 MYLKP1-201ENST00000509077 1580 ntBASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PRDM9Q9NQV7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms