Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.89■□□□□ 0.3
HMG20AQ9NP66 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AL391005.1-201ENST00000623953 2435 ntBASIC16.89■□□□□ 0.29
HMG20AQ9NP66 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AL031963.3-201ENST00000606441 850 ntBASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AC080038.1-201ENST00000611274 1154 ntBASIC16.89■□□□□ 0.29
HMG20AQ9NP66 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 AC108860.2-201ENST00000562760 2183 ntBASIC16.89■□□□□ 0.29
HMG20AQ9NP66 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20AQ9NP66 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 KRT8P20-201ENST00000423953 1409 ntBASIC16.88■□□□□ 0.29
HMG20AQ9NP66 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 AC093787.1-201ENST00000450396 207 ntBASIC16.88■□□□□ 0.29
HMG20AQ9NP66 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20AQ9NP66 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 NKILA-202ENST00000614771 2598 ntBASIC16.87■□□□□ 0.29
HMG20AQ9NP66 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20AQ9NP66 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms