Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL13Q99616 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL13Q99616 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL13Q99616 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 AC034236.2-201ENST00000606662 1610 ntBASIC15.55■□□□□ 0.08
CCL13Q99616 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 KRT18P23-201ENST00000435622 1283 ntBASIC15.55■□□□□ 0.08
CCL13Q99616 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL13Q99616 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL13Q99616 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 AL499627.1-201ENST00000569373 2188 ntBASIC15.55■□□□□ 0.08
CCL13Q99616 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL13Q99616 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 AC073508.3-201ENST00000619697 1419 ntBASIC15.54■□□□□ 0.08
CCL13Q99616 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCL13Q99616 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCL13Q99616 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 RCN1P1-201ENST00000400413 996 ntBASIC15.54■□□□□ 0.08
CCL13Q99616 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.54■□□□□ 0.08
CCL13Q99616 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 AC140113.3-201ENST00000605663 199 ntBASIC15.54■□□□□ 0.08
CCL13Q99616 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL13Q99616 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCL13Q99616 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL13Q99616 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL13Q99616 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL13Q99616 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.53■□□□□ 0.08
CCL13Q99616 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 BX664615.1-201ENST00000443558 458 ntBASIC15.53■□□□□ 0.08
CCL13Q99616 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL13Q99616 RN7SL850P-201ENST00000579959 291 ntBASIC15.53■□□□□ 0.08
CCL13Q99616 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL13Q99616 AC024243.1-201ENST00000609234 778 ntBASIC15.53■□□□□ 0.08
CCL13Q99616 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 AC112497.1-201ENST00000624824 639 ntBASIC15.53■□□□□ 0.08
CCL13Q99616 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL13Q99616 AC092865.7-201ENST00000641832 219 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms