Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H4Q96RI1 AC104417.2-201ENST00000562989 1793 ntBASIC17.51■□□□□ 0.39
NR1H4Q96RI1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 FLJ13224-201ENST00000313737 1514 ntBASIC17.5■□□□□ 0.39
NR1H4Q96RI1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 PCDH8P1-201ENST00000428983 2773 ntBASIC17.5■□□□□ 0.39
NR1H4Q96RI1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H4Q96RI1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.49■□□□□ 0.39
NR1H4Q96RI1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR1H4Q96RI1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms