Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 AC124016.1-201ENST00000609552 612 ntBASIC16.92■□□□□ 0.3
SNX18Q96RF0 AC110285.5-201ENST00000611501 352 ntBASIC16.92■□□□□ 0.3
SNX18Q96RF0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 AL023875.1-201ENST00000640777 796 ntBASIC16.92■□□□□ 0.3
SNX18Q96RF0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX18Q96RF0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SNX18Q96RF0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 AL353708.3-201ENST00000610272 989 ntBASIC16.91■□□□□ 0.3
SNX18Q96RF0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX18Q96RF0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX18Q96RF0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 PRSS44-201ENST00000515154 1146 ntBASIC16.9■□□□□ 0.3
SNX18Q96RF0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms