Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 ECEL1P2-202ENST00000465689 757 ntBASIC21.98■■□□□ 1.11
NEK1Q96PY6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NEK1Q96PY6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 FAM87A-204ENST00000613235 858 ntBASIC21.97■■□□□ 1.11
NEK1Q96PY6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.97■■□□□ 1.11
NEK1Q96PY6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEK1Q96PY6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 LINC01568-207ENST00000641790 1380 ntBASIC21.96■■□□□ 1.11
NEK1Q96PY6 AC020763.4-201ENST00000623414 4170 ntBASIC21.96■■□□□ 1.11
NEK1Q96PY6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 HOXB1-202ENST00000577092 1414 ntBASIC21.96■■□□□ 1.11
NEK1Q96PY6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NEK1Q96PY6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK1Q96PY6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
NEK1Q96PY6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 MIR1224-201ENST00000408193 85 ntBASIC21.95■■□□□ 1.1
NEK1Q96PY6 AC087499.1-201ENST00000418141 1075 ntBASIC21.95■■□□□ 1.1
NEK1Q96PY6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 FAM210CP-201ENST00000445714 574 ntBASIC21.95■■□□□ 1.1
NEK1Q96PY6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK1Q96PY6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK1Q96PY6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms