Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 CDCA4P2-201ENST00000441182 718 ntBASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 AC006970.2-201ENST00000450065 779 ntBASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 AF201337.1-201ENST00000520239 748 ntBASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP6Q96FZ7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHMP6Q96FZ7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CHMP6Q96FZ7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CHMP6Q96FZ7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP6Q96FZ7 KRT17P1-201ENST00000399211 1546 ntBASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 HEIH-201ENST00000623091 1652 ntBASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP6Q96FZ7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP6Q96FZ7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms