Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.96■□□□□ 0.63
RTP4Q96DX8 AL023803.3-201ENST00000615559 522 ntBASIC18.96■□□□□ 0.63
RTP4Q96DX8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 AC097493.4-201ENST00000641197 219 ntBASIC18.96■□□□□ 0.63
RTP4Q96DX8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 CRYGFP-201ENST00000418459 633 ntBASIC18.95■□□□□ 0.62
RTP4Q96DX8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 AC012306.2-201ENST00000609350 630 ntBASIC18.95■□□□□ 0.62
RTP4Q96DX8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.95■□□□□ 0.62
RTP4Q96DX8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTP4Q96DX8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.94■□□□□ 0.62
RTP4Q96DX8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 AC068880.1-201ENST00000507289 2297 ntBASIC18.94■□□□□ 0.62
RTP4Q96DX8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTP4Q96DX8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
RTP4Q96DX8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AC008764.6-201ENST00000595909 2069 ntBASIC18.93■□□□□ 0.62
RTP4Q96DX8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AC010331.1-201ENST00000611423 582 ntBASIC18.93■□□□□ 0.62
RTP4Q96DX8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AC036111.1-201ENST00000533973 1582 ntBASIC18.93■□□□□ 0.62
RTP4Q96DX8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms