Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 KRT18P41-201ENST00000518924 1277 ntBASIC19.12■□□□□ 0.65
HDAC11Q96DB2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 MIR3180-5-201ENST00000583743 153 ntBASIC19.12■□□□□ 0.65
HDAC11Q96DB2 MYC-208ENST00000641036 567 ntBASIC19.12■□□□□ 0.65
HDAC11Q96DB2 AC116562.4-202ENST00000641738 218 ntBASIC19.12■□□□□ 0.65
HDAC11Q96DB2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC11Q96DB2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 AC073592.3-201ENST00000625118 1834 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 AC112777.1-201ENST00000540175 1423 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 KRT8P9-201ENST00000558927 1449 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 AC005082.1-201ENST00000413042 2259 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 MMP23A-201ENST00000234610 1017 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 MIR564-202ENST00000385049 94 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 EGLN1P1-201ENST00000531623 762 ntBASIC19.11■□□□□ 0.65
HDAC11Q96DB2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDAC11Q96DB2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.1■□□□□ 0.65
HDAC11Q96DB2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 AC007663.1-201ENST00000438948 1240 ntBASIC19.1■□□□□ 0.65
HDAC11Q96DB2 BX088651.1-201ENST00000540551 451 ntBASIC19.1■□□□□ 0.65
HDAC11Q96DB2 AC010653.2-201ENST00000623505 997 ntBASIC19.1■□□□□ 0.65
HDAC11Q96DB2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 AC090164.3-201ENST00000610780 2143 ntBASIC19.1■□□□□ 0.65
HDAC11Q96DB2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDAC11Q96DB2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 AC126763.1-201ENST00000552015 2118 ntBASIC19.09■□□□□ 0.65
HDAC11Q96DB2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 AC009113.1-201ENST00000570267 2443 ntBASIC19.09■□□□□ 0.65
HDAC11Q96DB2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC11Q96DB2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms