Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.33■■□□□ 1.48
RAPGEF4Q8WZA2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.33■■□□□ 1.48
RAPGEF4Q8WZA2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 HLA-A-201ENST00000376802 1334 ntBASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF4Q8WZA2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 TSPY12P-201ENST00000421279 868 ntBASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 AC004263.2-201ENST00000617183 678 ntBASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 AC023511.2-201ENST00000618803 211 ntBASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.31■■□□□ 1.48
RAPGEF4Q8WZA2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 AF238378.1-201ENST00000526806 358 ntBASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 MTMR9LP-203ENST00000426597 1545 ntBASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 AL163051.1-201ENST00000569214 1512 ntBASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RAPGEF4Q8WZA2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 AP000593.1-201ENST00000393668 712 ntBASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 KRT18P41-201ENST00000518924 1277 ntBASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RAPGEF4Q8WZA2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms