Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 REXO1L3P-201ENST00000622202 1288 ntBASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 INTS4P1-201ENST00000438455 1935 ntBASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 AL121603.2-201ENST00000557373 2117 ntBASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE2Q8WXH0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 BX005266.1-201ENST00000473402 457 ntBASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC008677.1-201ENST00000519230 1561 ntBASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC091046.1-201ENST00000331871 207 ntBASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms