Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SMIM11BQ8TCY0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SMIM11BQ8TCY0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SMIM11BQ8TCY0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
SMIM11BQ8TCY0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AC027612.3-201ENST00000413684 1047 ntBASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AL136967.2-201ENST00000623968 743 ntBASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 KRT8P8-201ENST00000434750 1448 ntBASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AC004854.2-201ENST00000608450 1441 ntBASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM11BQ8TCY0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 AC011676.5-201ENST00000624864 2660 ntBASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 AC010536.3-201ENST00000620306 533 ntBASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM11BQ8TCY0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 NFIC-211ENST00000641145 8399 ntBASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 AC022211.2-201ENST00000585075 2527 ntBASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SMIM11BQ8TCY0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms