Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 AC034232.1-201ENST00000506026 1064 ntBASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 HYMAI.1-201ENST00000620949 238 ntBASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 AC120498.9-201ENST00000339021 3867 ntBASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC155Q8N6L0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC155Q8N6L0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 AC026396.1-201ENST00000419388 421 ntBASIC21■□□□□ 0.95
CCDC155Q8N6L0 SPDYE15P-201ENST00000424157 909 ntBASIC21■□□□□ 0.95
CCDC155Q8N6L0 ATP5G2P1-201ENST00000433580 426 ntBASIC21■□□□□ 0.95
CCDC155Q8N6L0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC155Q8N6L0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC155Q8N6L0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 CR769767.2-201ENST00000622735 460 ntBASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC155Q8N6L0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms