Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 IGHV3-22-201ENST00000520721 359 ntBASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 KRT18P58-201ENST00000527480 1120 ntBASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 MINOS1P3-201ENST00000457048 203 ntBASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 PGAM5P1-201ENST00000518923 814 ntBASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL27A1Q8IZC6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 MIR149-201ENST00000384879 89 ntBASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.46■□□□□ 0.38
COL27A1Q8IZC6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 POM121L3P-201ENST00000419331 1163 ntBASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 LINC01711-201ENST00000598340 967 ntBASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 AL163051.1-201ENST00000569214 1512 ntBASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.45■□□□□ 0.38
COL27A1Q8IZC6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 CLDN5-201ENST00000403084 2357 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AC073648.2-201ENST00000510116 352 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AC106730.1-201ENST00000566722 1090 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AC139887.3-201ENST00000568585 713 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms