Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 FP475955.4-201ENST00000623131 1990 ntBASIC18.9■□□□□ 0.62
CHPFQ8IZ52 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CHPFQ8IZ52 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHPFQ8IZ52 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHPFQ8IZ52 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHPFQ8IZ52 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 AC141586.3-201ENST00000562166 1838 ntBASIC18.89■□□□□ 0.61
CHPFQ8IZ52 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 MIR662-201ENST00000384847 95 ntBASIC18.89■□□□□ 0.61
CHPFQ8IZ52 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHPFQ8IZ52 AC034236.2-201ENST00000606662 1610 ntBASIC18.89■□□□□ 0.61
CHPFQ8IZ52 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 TSPY22P-201ENST00000427496 604 ntBASIC18.88■□□□□ 0.61
CHPFQ8IZ52 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 AP002414.4-201ENST00000589764 1148 ntBASIC18.88■□□□□ 0.61
CHPFQ8IZ52 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHPFQ8IZ52 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AC026396.1-201ENST00000419388 421 ntBASIC18.87■□□□□ 0.61
CHPFQ8IZ52 CHCHD2P8-201ENST00000429873 447 ntBASIC18.87■□□□□ 0.61
CHPFQ8IZ52 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AP002383.4-201ENST00000442518 975 ntBASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms