Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 MIR940-201ENST00000401276 94 ntBASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SDK1Q7Z5N4 AC018712.1-201ENST00000455767 687 ntBASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 AP003733.1-201ENST00000491725 852 ntBASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 AL109659.2-201ENST00000606809 1674 ntBASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.39■□□□□ 0.54
SDK1Q7Z5N4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 PMS2P7-201ENST00000506558 1336 ntBASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 BX842568.4-201ENST00000421222 227 ntBASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 AC011840.4-201ENST00000578471 627 ntBASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 AC027601.4-201ENST00000611259 610 ntBASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SDK1Q7Z5N4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 AC055717.3-201ENST00000622967 595 ntBASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 NUS1P2-201ENST00000417358 873 ntBASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 HNRNPDP1-201ENST00000439535 754 ntBASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDK1Q7Z5N4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDK1Q7Z5N4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms