Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 GCSHP2-201ENST00000560971 527 ntBASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 AL031432.5-201ENST00000641059 760 ntBASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
RFWD3Q6PCD5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 AL109659.2-201ENST00000606809 1674 ntBASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 NEK4P2-201ENST00000580004 1012 ntBASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFWD3Q6PCD5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 AC018470.1-201ENST00000624790 3129 ntBASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFWD3Q6PCD5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 AC092647.4-201ENST00000457211 535 ntBASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 AL359075.1-203ENST00000462729 1002 ntBASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms