Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 LAGE3P1-201ENST00000425356 484 ntBASIC16.07■□□□□ 0.16
LRRK2Q5S007 PAWRP1-201ENST00000451083 565 ntBASIC16.07■□□□□ 0.16
LRRK2Q5S007 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 AC108751.1-201ENST00000490852 363 ntBASIC16.07■□□□□ 0.16
LRRK2Q5S007 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC092474.2-201ENST00000424288 719 ntBASIC16.06■□□□□ 0.16
LRRK2Q5S007 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC107918.4-202ENST00000641623 219 ntBASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC034236.2-201ENST00000606662 1610 ntBASIC16.06■□□□□ 0.16
LRRK2Q5S007 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 Z92544.3-201ENST00000624747 417 ntBASIC16.06■□□□□ 0.16
LRRK2Q5S007 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRK2Q5S007 AC006333.2-201ENST00000607957 2099 ntBASIC16.06■□□□□ 0.16
LRRK2Q5S007 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRK2Q5S007 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 AL139400.1-201ENST00000366220 510 ntBASIC16.05■□□□□ 0.16
LRRK2Q5S007 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 AC026310.3-201ENST00000625186 2373 ntBASIC16.05■□□□□ 0.16
LRRK2Q5S007 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.05■□□□□ 0.16
LRRK2Q5S007 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 RCN1P2-201ENST00000398357 915 ntBASIC16.05■□□□□ 0.16
LRRK2Q5S007 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRK2Q5S007 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRK2Q5S007 AP002414.3-201ENST00000589352 1468 ntBASIC16.05■□□□□ 0.16
LRRK2Q5S007 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 KRT18P27-201ENST00000427733 1299 ntBASIC16.04■□□□□ 0.16
LRRK2Q5S007 KRT18P2-201ENST00000447938 1258 ntBASIC16.04■□□□□ 0.16
LRRK2Q5S007 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 HLA-V-201ENST00000429037 534 ntBASIC16.04■□□□□ 0.16
LRRK2Q5S007 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 MKNK2P1-201ENST00000437526 628 ntBASIC16.04■□□□□ 0.16
LRRK2Q5S007 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms