Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
RSPO4Q2I0M5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RSPO4Q2I0M5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AL391422.3-201ENST00000603791 2761 ntBASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AC005829.1-201ENST00000570002 483 ntBASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AP002472.1-201ENST00000577490 586 ntBASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 KRT8P3-201ENST00000519669 1449 ntBASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO4Q2I0M5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PCDHAC2-203ENST00000615316 3011 ntBASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 UNC93B6-202ENST00000528242 690 ntBASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 MIR1199-201ENST00000621445 119 ntBASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 AC073130.3-201ENST00000624389 2278 ntBASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms