Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 MIR3652-201ENST00000579335 131 ntBASIC22.25■■□□□ 1.15
PDS5AQ29RF7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 KRT18P1-202ENST00000452408 1331 ntBASIC22.24■■□□□ 1.15
PDS5AQ29RF7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 RN7SL606P-201ENST00000472779 293 ntBASIC22.24■■□□□ 1.15
PDS5AQ29RF7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDS5AQ29RF7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.23■■□□□ 1.15
PDS5AQ29RF7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 SDHAP2-201ENST00000455183 2001 ntBASIC22.22■■□□□ 1.15
PDS5AQ29RF7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 NUS1P1-201ENST00000446295 882 ntBASIC22.22■■□□□ 1.15
PDS5AQ29RF7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 AL353692.3-201ENST00000407031 1396 ntBASIC22.22■■□□□ 1.15
PDS5AQ29RF7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDS5AQ29RF7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 AL592071.1-201ENST00000611956 408 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms